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Change in transcript

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I am in my fourth year at Uottawa and I am planning to do a fifth year and apply in the French stream. I have done most of the prereqs, except for biochem that I plan on taking in fall and repeat orgo because I've failed to get a B. Can I enroll in orgo and biochem for the fall semester of 2021 at the time of submitting my application so that they appear as "in progress" on my transcript? Will they be considered even though the transcript needs to be submitted by Oct. 1 to satisfy the transcript deadline requirement and will a repeated course hinder my chances?

Thank you,

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